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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic
Information? help
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TF ID |
30024.m001746 |
Common Name | RCOM_1244860 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Family |
GRAS |
Protein Properties |
Length: 451aa MW: 50679.6 Da PI: 6.8357 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
30024.m001746 | genome | JCVI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 459.2 | 2.6e-140 | 27 | 448 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96
l++lLl+c ++v++g+le+a+ +L ++s+las +gd+mqR+aayfteALa+r+ + ++++ +al++++ + +see+ ++klf+e++P+lk++++
30024.m001746 27 LIHLLLTCGNHVAAGSLENAEIALGQISQLASAEGDTMQRIAAYFTEALAHRIIKAWPGVHRALNATKIT--LVSEEILVRKLFFEMFPFLKVGFV 120
689*************************************************************999998..7*********************** PP
GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
++NqaI ea+ege++vHiiD+++ +++QW+aLlqaL++R+egpp+lRiTg+++ +ke l +++++L++ Ae+l++pf+fn+ ++++le+l++e
30024.m001746 121 ITNQAIIEAMEGEKMVHIIDLNAVEPAQWLALLQALSARREGPPHLRITGIHQ----QKEVLDQMAHKLSEEAERLDIPFQFNP-IVSKLENLDIE 211
*****************************************************....9**************************.7999******* PP
GRAS 193 eLrvkpgEalaVnlvlqlhrll.........................................................desvsleserdevLklv 231
+Lrvk+gEala+++vlqlh++l ++++s+ + d +L+++
30024.m001746 212 KLRVKTGEALAISSVLQLHSFLasddelrkrspvtlknsngmhlqrvlpanqgtlgellekdmvngyspsshstsssplSSTASV--KMDYFLNTL 305
*************************************************************************987654333333..4699***** PP
GRAS 232 kslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpv 327
+slsPk++vv+eq+++hn++s++er+leal+ y+alfd+le++++r+s er kvE++l+g+ei+n+++c gaer+erhe+le+W +rl+ aGF++v
30024.m001746 306 WSLSPKLMVVMEQDSNHNGSSLMERLLEALYSYAALFDCLESTVSRTSLERLKVEKMLFGEEIKNIISCDGAERKERHEKLERWIQRLDLAGFGNV 401
************************************************************************************************ PP
GRAS 328 plsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
pls+ qa++ll+ ++ dgyr+++e+g++v++W+drpL+s+SaWr
30024.m001746 402 PLSYCGLLQARRLLQGYGCDGYRIKDENGCVVICWQDRPLFSLSAWR 448
**********************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 451 aa
Download sequence Send
to blast |
MMSLSPGMGS PYPWLRELKS EERGLYLIHL LLTCGNHVAA GSLENAEIAL GQISQLASAE 60 GDTMQRIAAY FTEALAHRII KAWPGVHRAL NATKITLVSE EILVRKLFFE MFPFLKVGFV 120 ITNQAIIEAM EGEKMVHIID LNAVEPAQWL ALLQALSARR EGPPHLRITG IHQQKEVLDQ 180 MAHKLSEEAE RLDIPFQFNP IVSKLENLDI EKLRVKTGEA LAISSVLQLH SFLASDDELR 240 KRSPVTLKNS NGMHLQRVLP ANQGTLGELL EKDMVNGYSP SSHSTSSSPL SSTASVKMDY 300 FLNTLWSLSP KLMVVMEQDS NHNGSSLMER LLEALYSYAA LFDCLESTVS RTSLERLKVE 360 KMLFGEEIKN IISCDGAERK ERHEKLERWI QRLDLAGFGN VPLSYCGLLQ ARRLLQGYGC 420 DGYRIKDENG CVVICWQDRP LFSLSAWRCK K
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